PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC003469.40
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 274aa    MW: 30940.9 Da    PI: 6.6428
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC003469.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.000491031362055
                   HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH  20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +  Lr+ lP  +   ++K s ++   ++v+YI+++q
  EcC003469.40 103 YGSLRKQLPIEF--LKGKRSISDHIHETVNYIRHMQ 136
                   568999***965..99*******************9 PP

Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003723Molecular FunctionRNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MSYFTSTIPF DETDEFFQCS SFDSHQQHHQ VDNYDDILYQ LSSPPDGNFF IGETLDDHGR  60
QGNKTSSVFD KPTAGAKPNG NTSKNKKVVH RDIEXXXXXX XXYGSLRKQL PIEFLKGKRS  120
ISDHIHETVN YIRHMQNKIQ ALSDRRDELK GLSDSGAPKE TPECSRTACS QGDTVMVQSC  180
MAGVEILINT ASQQGLPLSR AFKALSEEGV NVFSCNSTQV SERILHSIKA EVPLSLNIPQ  240
RMHIMPILLG FHLKFHFNPL IDEAPILYWG YLCR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053369.11e-164PREDICTED: transcription factor bHLH120-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-28bHLH family protein